Commit 7690f154 authored by Leonardo Solis's avatar Leonardo Solis
Browse files

added GFPOP flag + improved rules readability


Former-commit-id: 4039a0ed
parent 8fad1957
......@@ -97,9 +97,11 @@ endef
# Following values are used only for emulation
# to have a short but still a representative test
PDB := 1stp
PSIZE:= 150
NRUN := 10
NEV := 800000
NGEN := 27000
GFPOP:= 0
# Switching to the other SDAccel 2017.4 default platform
# As it is available in Xelera "saruman" server
......@@ -162,7 +164,10 @@ kerhwemu:
#emconfigutil --platform xilinx_vcu1525_dynamic_5_0 --nd 1
swemu: kerswemu
emconfigutil --platform $(BOARD) --nd $(NDEVICES_EMU)
XCL_EMULATION_MODE=sw_emu ./$(EXES) -ffile input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop 1
XCL_EMULATION_MODE=sw_emu ./$(EXES) \
-ffile input/$(PDB)/derived/$(PDB)_protein.maps.fld \
-lfile input/$(PDB)/derived/$(PDB)_ligand.pdbqt \
-psize $(PSIZE) -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop 1
@echo $(newline)
@echo "==========================================================================="
@echo "INFO: swemu log file is under: \"./docking.dlg\" "
......@@ -179,7 +184,10 @@ swemu: kerswemu
hwemu: kerhwemu
emconfigutil --platform $(BOARD) --nd $(NDEVICES_EMU)
XCL_EMULATION_MODE=hw_emu ./$(EXES) -ffile input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop 1
XCL_EMULATION_MODE=hw_emu ./$(EXES) \
-ffile input/$(PDB)/derived/$(PDB)_protein.maps.fld \
-lfile input/$(PDB)/derived/$(PDB)_ligand.pdbqt \
-psize $(PSIZE) -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop 1
@echo $(newline)
@echo "==========================================================================="
@echo "INFO: hwemu log file is under: \"./docking.dlg\" "
......@@ -206,7 +214,11 @@ hw:
sw-debug:
XCL_EMULATION_MODE=sw_emu xgdb -args ./$(EXES) -ffile input/1stp/derived/1stp_protein.maps.fld -lfile input/1stp/derived/1stp_ligand.pdbqt -nrun 1 -nev 100 -lsit 10 -psize 10
XCL_EMULATION_MODE=sw_emu \
xgdb -args ./$(EXES) \
-ffile input/1stp/derived/1stp_protein.maps.fld \
-lfile input/1stp/derived/1stp_ligand.pdbqt \
-nrun 1 -nev 100 -lsit 10 -psize 10
# Execute on remote server
......@@ -215,7 +227,11 @@ sw-debug:
# The working directory is changed
# So .dlg file is written in $(TARGET_DIR_HW)
eva: exe
./$(EXES) -ffile input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nev $(NEV) -nrun $(NRUN) -gfpop 1
./$(EXES) \
-ffile input/$(PDB)/derived/$(PDB)_protein.maps.fld \
-lfile input/$(PDB)/derived/$(PDB)_ligand.pdbqt \
-resnam docking_$(PDB)_$(NRUN) \
-nrun $(NRUN) -gfpop $(GFPOP)
@echo $(newline)
@echo "==========================================================================="
@echo "INFO: evaluation log file is under: \"./docking.dlg\" "
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment