Commit 8d98e141 authored by Leonardo Solis's avatar Leonardo Solis

improved readability rules

parent de6cae32
......@@ -751,6 +751,7 @@ $(TARGET_DIR)/$(TARGET) : Makefile $(SRCS) $(INCS) $(TARGET_DIR)
# Following values are used only for emulation
# to have a short but still a representative test
PDB := 1stp
PSIZE:= 150
NRUN := 5
NEV := 50000
NGEN := 27000
......@@ -793,7 +794,10 @@ keremu: $(DEV_SRC)
# So .dlg file is written in $(TARGET_DIR)
emu: $(TARGET_DIR)/$(TARGET) keremu
cd $(TARGET_DIR) && \
CL_CONTEXT_EMULATOR_DEVICE_ALTERA=1 ./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop $(GFPOP)
CL_CONTEXT_EMULATOR_DEVICE_ALTERA=1 ./$(TARGET) \
-ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld \
-lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt \
-psize $(PSIZE) -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop 1
@echo $(newline)
@echo "======================================================="
@echo "INFO: log file is under: \"$(TARGET_DIR)/docking.dlg\" "
......@@ -867,7 +871,11 @@ hw-prof:
exe: $(TARGET_DIR)/$(TARGET)
cp $(TARGET_DIR)/$(TARGET) $(TARGET_DIR_HW)/ && \
cd $(TARGET_DIR_HW) && \
./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -resnam docking_$(PDB)_$(NRUN) -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop $(GFPOP)
./$(TARGET) \
-ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld \
-lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt \
-resnam docking_$(PDB)_$(NRUN) \
-nrun $(NRUN) -gfpop $(GFPOP)
@echo $(newline)
@echo "========================================================================="
@echo "INFO: log file is under: \"$(TARGET_DIR_HW)/docking_$(PDB)_$(NRUN).dlg\" "
......@@ -883,7 +891,11 @@ exe: $(TARGET_DIR)/$(TARGET)
exe-prof: $(TARGET_DIR)/$(TARGET)
cp $(TARGET_DIR)/$(TARGET) $(TARGET_DIR_HW_PROF)/ && \
cd $(TARGET_DIR_HW_PROF) && \
./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -resnam docking_$(PDB)_$(NRUN) -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop $(GFPOP)
./$(TARGET) \
-ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld \
-lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt \
-resnam docking_$(PDB)_$(NRUN) \
-nrun $(NRUN) -gfpop $(GFPOP)
@echo $(newline)
@echo "=============================================================================="
@echo "INFO: log file is under: \"$(TARGET_DIR_HW_PROF)/docking_$(PDB)_$(NRUN).dlg\" "
......
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