Commit de6cae32 authored by Leonardo Solis's avatar Leonardo Solis

added gfpop flags

parent aeeb0b77
......@@ -753,7 +753,8 @@ $(TARGET_DIR)/$(TARGET) : Makefile $(SRCS) $(INCS) $(TARGET_DIR)
PDB := 1stp
NRUN := 5
NEV := 50000
NGEN := 27000
NGEN := 27000
GFPOP:= 0
# Project name
PROJECT_NAME := ofdock_taskpar_alt
......@@ -792,7 +793,7 @@ keremu: $(DEV_SRC)
# So .dlg file is written in $(TARGET_DIR)
emu: $(TARGET_DIR)/$(TARGET) keremu
cd $(TARGET_DIR) && \
CL_CONTEXT_EMULATOR_DEVICE_ALTERA=1 ./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop 1
CL_CONTEXT_EMULATOR_DEVICE_ALTERA=1 ./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop $(GFPOP)
@echo $(newline)
@echo "======================================================="
@echo "INFO: log file is under: \"$(TARGET_DIR)/docking.dlg\" "
......@@ -866,7 +867,7 @@ hw-prof:
exe: $(TARGET_DIR)/$(TARGET)
cp $(TARGET_DIR)/$(TARGET) $(TARGET_DIR_HW)/ && \
cd $(TARGET_DIR_HW) && \
./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -resnam docking_$(PDB)_$(NRUN)
./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -resnam docking_$(PDB)_$(NRUN) -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop $(GFPOP)
@echo $(newline)
@echo "========================================================================="
@echo "INFO: log file is under: \"$(TARGET_DIR_HW)/docking_$(PDB)_$(NRUN).dlg\" "
......@@ -882,7 +883,7 @@ exe: $(TARGET_DIR)/$(TARGET)
exe-prof: $(TARGET_DIR)/$(TARGET)
cp $(TARGET_DIR)/$(TARGET) $(TARGET_DIR_HW_PROF)/ && \
cd $(TARGET_DIR_HW_PROF) && \
./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -resnam docking_$(PDB)_$(NRUN)
./$(TARGET) -ffile ../input/$(PDB)/derived/$(PDB)_protein.maps.fld -lfile ../input/$(PDB)/derived/$(PDB)_ligand.pdbqt -nrun $(NRUN) -resnam docking_$(PDB)_$(NRUN) -nrun $(NRUN) -nev $(NEV) -ngen $(NGEN) -gfpop $(GFPOP)
@echo $(newline)
@echo "=============================================================================="
@echo "INFO: log file is under: \"$(TARGET_DIR_HW_PROF)/docking_$(PDB)_$(NRUN).dlg\" "
......
  • In order to avoid confusion in the real evaluation, only emu rule is fully parametrized, while exe and exe-prof will be limited to nrun.

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