LS replicated 5 times (f170a58d) · Commits · docking / ocladock-fpga

ofdock_taskpar_alt/Makefile

+50 −2

Original line number	Diff line number	Diff line
		@@ -212,6 +212,14 @@ ENABLE_K35 = YES
		# bt ushort_float
		ENABLE_K36 = YES

		# prng ls4, ls5
		ENABLE_K37 = YES
		ENABLE_K38 = YES

		# krnl_ls4, Krnl_ls5
		ENABLE_K39 = YES
		ENABLE_K40 = YES


		ifeq ($(ENABLE_K1),YES)
		K1 =-DENABLE_KERNEL1
		@@ -435,7 +443,31 @@ else
		K36 =
		endif

		ENABLE_KERNELS = $(K1) $(K2) $(K3) $(K4) $(K5) $(K6) $(K7) $(K8) $(K9) $(K10) $(K11) $(K12) $(K13) $(K14) $(K15) $(K16) $(K17) $(K18) $(K19) $(K20) $(K21) $(K22) $(K23) $(K24) $(K25) $(K26) $(K27) $(K28) $(K29) $(K30) $(K31) $(K32) $(K33) $(K34) $(K35) $(K36)
		ifeq ($(ENABLE_K37),YES)
		K37 =-DENABLE_KERNEL37
		else
		K37 =
		endif

		ifeq ($(ENABLE_K38),YES)
		K38 =-DENABLE_KERNEL38
		else
		K38 =
		endif

		ifeq ($(ENABLE_K39),YES)
		K39 =-DENABLE_KERNEL39
		else
		K39 =
		endif

		ifeq ($(ENABLE_K40),YES)
		K40 =-DENABLE_KERNEL40
		else
		K40 =
		endif

		ENABLE_KERNELS = $(K1) $(K2) $(K3) $(K4) $(K5) $(K6) $(K7) $(K8) $(K9) $(K10) $(K11) $(K12) $(K13) $(K14) $(K15) $(K16) $(K17) $(K18) $(K19) $(K20) $(K21) $(K22) $(K23) $(K24) $(K25) $(K26) $(K27) $(K28) $(K29) $(K30) $(K31) $(K32) $(K33) $(K34) $(K35) $(K36) $(K37) $(K38) $(K39) $(K40)

		# =============================
		# Reproduce result (remove randomness)
		@@ -461,9 +493,13 @@ FIXED_POINT_INTRAE=NO
		FIXED_POINT_LS1=YES
		FIXED_POINT_LS2=YES
		FIXED_POINT_LS3=YES
		FIXED_POINT_LS4=YES
		FIXED_POINT_LS5=YES
		#FIXED_POINT_LS1=NO
		#FIXED_POINT_LS2=NO
		#FIXED_POINT_LS3=NO
		#FIXED_POINT_LS4=NO
		#FIXED_POINT_LS5=NO

		SINGLE_COPY_POP_ENE=YES

		@@ -505,6 +541,18 @@ else
		FIPOLS3_FLAG=
		endif

		ifeq ($(FIXED_POINT_LS4), YES)
		FIPOLS4_FLAG=-DFIXED_POINT_LS4
		else
		FIPOLS4_FLAG=
		endif

		ifeq ($(FIXED_POINT_LS5), YES)
		FIPOLS5_FLAG=-DFIXED_POINT_LS5
		else
		FIPOLS5_FLAG=
		endif

		ifeq ($(SINGLE_COPY_POP_ENE), YES)
		COPYPOPENE_FLAG=-DSINGLE_COPY_POP_ENE
		else
		@@ -517,7 +565,7 @@ else
		SEP_FGRID_FLAG=
		endif

		FIPO_FLAG = $(FIPOCO_FLAG) $(FIPOIE_FLAG) $(FIPOIA_FLAG) $(FIPOLS1_FLAG) $(FIPOLS2_FLAG) $(FIPOLS3_FLAG) $(COPYPOPENE_FLAG) $(SEP_FGRID_FLAG)
		FIPO_FLAG = $(FIPOCO_FLAG) $(FIPOIE_FLAG) $(FIPOIA_FLAG) $(FIPOLS1_FLAG) $(FIPOLS2_FLAG) $(FIPOLS3_FLAG) $(FIPOLS4_FLAG) $(FIPOLS5_FLAG) $(COPYPOPENE_FLAG) $(SEP_FGRID_FLAG)

		# =============================
		# AOC flags

ofdock_taskpar_alt/device/Krnl_Conform.cl

+8 −0

Original line number	Diff line number	Diff line
		@@ -135,6 +135,14 @@ while(active) {
		case 0x03:
		fl_tmp = read_channel_altera(chan_LS2Conf_LS3_genotype);
		break;

		case 0x04:
		fl_tmp = read_channel_altera(chan_LS2Conf_LS4_genotype);
		break;

		case 0x05:
		fl_tmp = read_channel_altera(chan_LS2Conf_LS5_genotype);
		break;
		}

		if (i > 2) {

ofdock_taskpar_alt/device/Krnl_GA.cl

+66 −15

Original line number	Diff line number	Diff line
		@@ -19,6 +19,8 @@ channel float chan_GG2Conf_genotype __attribute__((depth(CHAN_DEPTH_G
		channel float chan_LS2Conf_LS1_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2Conf_LS2_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2Conf_LS3_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2Conf_LS4_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2Conf_LS5_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));

		// Conform to IE, IA
		channel float8 chan_Conf2Intere_xyz __attribute__((depth(CHAN_DEPTH_ATOMXYZ)));
		@@ -33,12 +35,16 @@ channel float chan_Intere2StoreGG_intere __attribute__((depth(2)));
		channel float chan_Intere2StoreLS_LS1_intere __attribute__((depth(2)));
		channel float chan_Intere2StoreLS_LS2_intere __attribute__((depth(2)));
		channel float chan_Intere2StoreLS_LS3_intere __attribute__((depth(2)));
		channel float chan_Intere2StoreLS_LS4_intere __attribute__((depth(2)));
		channel float chan_Intere2StoreLS_LS5_intere __attribute__((depth(2)));

		channel float chan_Intrae2StoreIC_intrae __attribute__((depth(2)));
		channel float chan_Intrae2StoreGG_intrae __attribute__((depth(2)));
		channel float chan_Intrae2StoreLS_LS1_intrae __attribute__((depth(2)));
		channel float chan_Intrae2StoreLS_LS2_intrae __attribute__((depth(2)));
		channel float chan_Intrae2StoreLS_LS3_intrae __attribute__((depth(2)));
		channel float chan_Intrae2StoreLS_LS4_intrae __attribute__((depth(2)));
		channel float chan_Intrae2StoreLS_LS5_intrae __attribute__((depth(2)));

		// PRNG kernerls
		channel float8 chan_PRNG2GA_BT_ushort_float_prng;
		@@ -46,11 +52,13 @@ channel float8 chan_PRNG2GA_BT_ushort_float_prng;
		channel uchar2 chan_PRNG2GA_GG_uchar_prng;
		channel float chan_PRNG2GA_GG_float_prng __attribute__((depth(CHAN_DEPTH_GENOTYPE)));

		channel ushort3 chan_PRNG2GA_LS123_ushort_prng;
		channel ushort8 chan_PRNG2GA_LS123_ushort_prng;

		channel float chan_PRNG2GA_LS_float_prng __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_PRNG2GA_LS2_float_prng __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_PRNG2GA_LS3_float_prng __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_PRNG2GA_LS4_float_prng __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_PRNG2GA_LS5_float_prng __attribute__((depth(CHAN_DEPTH_GENOTYPE)));

		channel bool chan_Arbiter_BT_ushort_float_off;
		channel bool chan_Arbiter_GG_uchar_off;
		@@ -59,34 +67,48 @@ channel bool chan_Arbiter_LS123_ushort_off;
		channel bool chan_Arbiter_LS_float_off;
		channel bool chan_Arbiter_LS2_float_off;
		channel bool chan_Arbiter_LS3_float_off;

		channel bool chan_Arbiter_LS4_float_off;
		channel bool chan_Arbiter_LS5_float_off;
		/*
		channel bool chan_GA2PRNG_LS_float_Off;

		*/
		// LS1, LS2, LS3
		channel float chan_GA2LS_LS1_energy;
		channel float chan_GA2LS_LS2_energy;
		channel float chan_GA2LS_LS3_energy;
		channel float chan_GA2LS_LS4_energy;
		channel float chan_GA2LS_LS5_energy;
		channel float chan_GA2LS_LS1_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_GA2LS_LS2_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_GA2LS_LS3_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_GA2LS_LS4_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_GA2LS_LS5_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));

		channel bool chan_LS2Arbiter_LS1_end;
		channel bool chan_LS2Arbiter_LS2_end;
		channel bool chan_LS2Arbiter_LS3_end;
		channel bool chan_LS2Arbiter_LS4_end;
		channel bool chan_LS2Arbiter_LS5_end;
		channel float2 chan_LS2GA_LS1_evalenergy __attribute__((depth(2)));
		channel float2 chan_LS2GA_LS2_evalenergy __attribute__((depth(2)));
		channel float2 chan_LS2GA_LS3_evalenergy __attribute__((depth(2)));
		channel float2 chan_LS2GA_LS4_evalenergy __attribute__((depth(2)));
		channel float2 chan_LS2GA_LS5_evalenergy __attribute__((depth(2)));
		channel float chan_LS2GA_LS1_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2GA_LS2_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2GA_LS3_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2GA_LS4_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));
		channel float chan_LS2GA_LS5_genotype __attribute__((depth(CHAN_DEPTH_GENOTYPE)));

		channel bool chan_GA2LS_Off1_active;
		channel bool chan_GA2LS_Off2_active;
		channel bool chan_GA2LS_Off3_active;
		channel bool chan_GA2LS_Off4_active;
		channel bool chan_GA2LS_Off5_active;

		// IGL_Arbiter -> Conform
		channel char2 chan_IGL2Conform_actmode __attribute__((depth(3))); // active, mode
		channel float chan_IGL2Conform_genotype __attribute__((depth(3*CHAN_DEPTH_GENOTYPE)));
		channel char2 chan_IGL2Conform_actmode __attribute__((depth(5))); // active, mode
		channel float chan_IGL2Conform_genotype __attribute__((depth(5*CHAN_DEPTH_GENOTYPE)));

		channel bool chan_IGLArbiter_Off;

		@@ -512,36 +534,45 @@ void Krnl_GA(__global float* restrict GlobPopulationCurrent,
		uint ls_eval_cnt = 0;

		#pragma ivdep
		//for (ushort ls_ent_cnt=0; ls_ent_cnt<DockConst_num_of_lsentities; ls_ent_cnt++) {
		for (ushort ls_ent_cnt=0; ls_ent_cnt<DockConst_num_of_lsentities; ls_ent_cnt+=3) {
		for (ushort ls_ent_cnt=0; ls_ent_cnt<DockConst_num_of_lsentities; ls_ent_cnt+=5) {

		// choose random & different entities on every iteration
		ushort3 entity_ls = read_channel_altera(chan_PRNG2GA_LS123_ushort_prng);
		ushort8 entity_ls = read_channel_altera(chan_PRNG2GA_LS123_ushort_prng);
		mem_fence(CLK_CHANNEL_MEM_FENCE);

		ushort entity_ls1 = entity_ls.x;
		ushort entity_ls2 = entity_ls.y;
		ushort entity_ls3 = entity_ls.z;
		ushort entity_ls1 = entity_ls.s0;
		ushort entity_ls2 = entity_ls.s1;
		ushort entity_ls3 = entity_ls.s2;
		ushort entity_ls4 = entity_ls.s3;
		ushort entity_ls5 = entity_ls.s4;

		write_channel_altera(chan_GA2LS_LS1_energy, LocalEneNext[entity_ls1]);
		write_channel_altera(chan_GA2LS_LS2_energy, LocalEneNext[entity_ls2]);
		write_channel_altera(chan_GA2LS_LS3_energy, LocalEneNext[entity_ls3]);
		write_channel_altera(chan_GA2LS_LS4_energy, LocalEneNext[entity_ls4]);
		write_channel_altera(chan_GA2LS_LS5_energy, LocalEneNext[entity_ls5]);
		mem_fence(CLK_CHANNEL_MEM_FENCE);

		for (uchar gene_cnt=0; gene_cnt<DockConst_num_of_genes; gene_cnt++) {
		write_channel_altera(chan_GA2LS_LS1_genotype, LocalPopNext[entity_ls1][gene_cnt & MASK_GENOTYPE]);
		write_channel_altera(chan_GA2LS_LS2_genotype, LocalPopNext[entity_ls2][gene_cnt & MASK_GENOTYPE]);
		write_channel_altera(chan_GA2LS_LS3_genotype, LocalPopNext[entity_ls3][gene_cnt & MASK_GENOTYPE]);
		write_channel_altera(chan_GA2LS_LS4_genotype, LocalPopNext[entity_ls4][gene_cnt & MASK_GENOTYPE]);
		write_channel_altera(chan_GA2LS_LS5_genotype, LocalPopNext[entity_ls5][gene_cnt & MASK_GENOTYPE]);
		}
		mem_fence(CLK_CHANNEL_MEM_FENCE);

		float2 evalenergy_tmp1;
		float2 evalenergy_tmp2;
		float2 evalenergy_tmp3;
		float2 evalenergy_tmp4;
		float2 evalenergy_tmp5;
		bool ls1_done = false;
		bool ls2_done = false;
		bool ls3_done = false;
		while( (ls1_done == false) \|\| (ls2_done == false) \|\| (ls3_done == false) ){
		bool ls4_done = false;
		bool ls5_done = false;
		while( (ls1_done == false) \|\| (ls2_done == false) \|\| (ls3_done == false) \|\| (ls4_done == false) \|\| (ls5_done == false)){
		if (ls1_done == false) {
		evalenergy_tmp1 = read_channel_nb_altera(chan_LS2GA_LS1_evalenergy, &ls1_done);
		}
		@@ -551,6 +582,12 @@ void Krnl_GA(__global float* restrict GlobPopulationCurrent,
		else if (ls3_done == false) {
		evalenergy_tmp3 = read_channel_nb_altera(chan_LS2GA_LS3_evalenergy, &ls3_done);
		}
		else if (ls4_done == false) {
		evalenergy_tmp4 = read_channel_nb_altera(chan_LS2GA_LS4_evalenergy, &ls4_done);
		}
		else if (ls5_done == false) {
		evalenergy_tmp5 = read_channel_nb_altera(chan_LS2GA_LS5_evalenergy, &ls5_done);
		}
		}

		#if defined (DEBUG_KRNL_LS)
		@@ -560,23 +597,31 @@ void Krnl_GA(__global float* restrict GlobPopulationCurrent,
		float eetmp1 = evalenergy_tmp1.x;
		float eetmp2 = evalenergy_tmp2.x;
		float eetmp3 = evalenergy_tmp3.x;
		float eetmp4 = evalenergy_tmp4.x;
		float eetmp5 = evalenergy_tmp5.x;

		uint eval_tmp1 = (uint)&eetmp1;
		uint eval_tmp2 = (uint)&eetmp2;
		uint eval_tmp3 = (uint)&eetmp3;
		uint eval_tmp4 = (uint)&eetmp4;
		uint eval_tmp5 = (uint)&eetmp5;

		LocalEneNext[entity_ls1] = evalenergy_tmp1.y;
		LocalEneNext[entity_ls2] = evalenergy_tmp2.y;
		LocalEneNext[entity_ls3] = evalenergy_tmp3.y;
		LocalEneNext[entity_ls4] = evalenergy_tmp4.y;
		LocalEneNext[entity_ls5] = evalenergy_tmp5.y;

		#pragma ivdep
		for (uchar gene_cnt=0; gene_cnt<DockConst_num_of_genes; gene_cnt++) {
		LocalPopNext[entity_ls1][gene_cnt & MASK_GENOTYPE] = read_channel_altera(chan_LS2GA_LS1_genotype);
		LocalPopNext[entity_ls2][gene_cnt & MASK_GENOTYPE] = read_channel_altera(chan_LS2GA_LS2_genotype);
		LocalPopNext[entity_ls3][gene_cnt & MASK_GENOTYPE] = read_channel_altera(chan_LS2GA_LS3_genotype);
		LocalPopNext[entity_ls4][gene_cnt & MASK_GENOTYPE] = read_channel_altera(chan_LS2GA_LS4_genotype);
		LocalPopNext[entity_ls5][gene_cnt & MASK_GENOTYPE] = read_channel_altera(chan_LS2GA_LS5_genotype);
		}

		ls_eval_cnt += eval_tmp1 + eval_tmp2 + eval_tmp3;
		ls_eval_cnt += eval_tmp1 + eval_tmp2 + eval_tmp3 + eval_tmp4 + eval_tmp5;

		#if defined (DEBUG_KRNL_LS)
		printf("%u, ls_eval_cnt: %u\n", ls_ent_cnt, ls_eval_cnt);
		@@ -634,12 +679,16 @@ void Krnl_GA(__global float* restrict GlobPopulationCurrent,
		write_channel_altera(chan_Arbiter_LS_float_off, false);
		write_channel_altera(chan_Arbiter_LS2_float_off, false);
		write_channel_altera(chan_Arbiter_LS3_float_off, false);
		write_channel_altera(chan_Arbiter_LS4_float_off, false);
		write_channel_altera(chan_Arbiter_LS5_float_off, false);
		mem_fence(CLK_CHANNEL_MEM_FENCE);

		// turn off LS kernels
		write_channel_altera(chan_GA2LS_Off1_active, false);
		write_channel_altera(chan_GA2LS_Off2_active, false);
		write_channel_altera(chan_GA2LS_Off3_active, false);
		write_channel_altera(chan_GA2LS_Off4_active, false);
		write_channel_altera(chan_GA2LS_Off5_active, false);
		mem_fence(CLK_CHANNEL_MEM_FENCE);

		// turn off IGL, Conform, IE, IA
		@@ -690,6 +739,8 @@ void Krnl_GA(__global float* restrict GlobPopulationCurrent,
		#include "Krnl_LS.cl"
		#include "Krnl_LS2.cl"
		#include "Krnl_LS3.cl"
		#include "Krnl_LS4.cl"
		#include "Krnl_LS5.cl"

		#include "Krnl_IGL_Arbiter.cl"
		#include "Krnl_Conform.cl"

ofdock_taskpar_alt/device/Krnl_IGL_Arbiter.cl

+87 −93

Original line number	Diff line number	Diff line
		@@ -19,6 +19,8 @@ while(active) {
		bool LS1_end_valid = false;
		bool LS2_end_valid = false;
		bool LS3_end_valid = false;
		bool LS4_end_valid = false;
		bool LS5_end_valid = false;

		bool Off_active;
		bool IC_active;
		@@ -26,6 +28,8 @@ while(active) {
		bool LS1_end_active;
		bool LS2_end_active;
		bool LS3_end_active;
		bool LS4_end_active;
		bool LS5_end_active;

		while (
		(Off_valid == false) &&
		@@ -33,7 +37,9 @@ while(active) {
		(GG_valid == false) &&
		(LS1_end_valid == false) &&
		(LS2_end_valid == false) &&
		(LS3_end_valid == false)
		(LS3_end_valid == false) &&
		(LS4_end_valid == false) &&
		(LS5_end_valid == false)
		){
		Off_active = read_channel_nb_altera(chan_IGLArbiter_Off, &Off_valid);
		IC_active = read_channel_nb_altera(chan_GA2IGL_IC_active, &IC_valid);
		@@ -41,11 +47,13 @@ while(active) {
		LS1_end_active = read_channel_nb_altera(chan_LS2Arbiter_LS1_end, &LS1_end_valid);
		LS2_end_active = read_channel_nb_altera(chan_LS2Arbiter_LS2_end, &LS2_end_valid);
		LS3_end_active = read_channel_nb_altera(chan_LS2Arbiter_LS3_end, &LS3_end_valid);
		LS4_end_active = read_channel_nb_altera(chan_LS2Arbiter_LS4_end, &LS4_end_valid);
		LS5_end_active = read_channel_nb_altera(chan_LS2Arbiter_LS5_end, &LS5_end_valid);
		}

		uchar bound_tmp = 0;
		active = Off_valid ? 0x00 : 0x01;
		char mode [3]; // mode for all LS
		char mode [5]; // mode for all LS

		/*
		float genotypeICGG [ACTUAL_GENOTYPE_LENGTH];
		@@ -54,110 +62,96 @@ while(active) {

		// get genotype from IC, GG, LS1, LS2, LS3
		if (active == 0x01) {
		//#pragma ivdep
		/*
		for (uchar i=0; i<DockConst_num_of_genes; i++) {
		*/

		if (IC_valid == true) {
		bound_tmp++;
		/*
		if (i == 0) {bound_tmp++; }
		genotypeICGG [i] = read_channel_altera(chan_IC2Conf_genotype);
		*/
		}
		else if (GG_valid == true) {
		bound_tmp++;
		/*
		if (i == 0) {bound_tmp++; }
		genotypeICGG [i] = read_channel_altera(chan_GG2Conf_genotype);
		*/
		}
		else{
		/*
		float genotype1;
		float genotype2;
		float genotype3;
		*/
		// Reorder the mode & genotype coming from LS
		if (LS1_end_valid) {mode[0] = 0x01; bound_tmp++;

		#if 0
		if (LS1_end_valid == true) {
		//printf("%-15s %5s\n", "LS1_valid: ", "reading genotypes");
		if (i == 0) {bound_tmp++; }
		genotype1 /[i]/ = read_channel_altera(chan_LS2Conf_LS1_genotype);
		if (LS2_end_valid) {mode[1] = 0x02; bound_tmp++;

		if (LS3_end_valid) {mode[2] = 0x03; bound_tmp++;
		if (LS4_end_valid) {mode[3] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[4] = 0x05; bound_tmp++;}
		}
		#endif
		/*
		if (LS2_end_valid == true) {
		genotype2 = read_channel_altera(chan_LS2Conf_LS2_genotype);
		else {
		if (LS5_end_valid) {mode[3] = 0x05; bound_tmp++;}
		}
		}
		else { // LS1: yes, LS2: yes, LS3: no
		if (LS4_end_valid) {mode[2] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[3] = 0x05; bound_tmp++;}
		}
		else {
		if (LS5_end_valid) {mode[2] = 0x05; bound_tmp++;}
		}
		if (LS3_end_valid == true) {
		genotype3 = read_channel_altera(chan_LS2Conf_LS3_genotype);
		}
		*/
		// Reorder the mode & genotype coming from LS
		if (LS1_end_valid) {
		mode[0] = 0x01; bound_tmp++;
		/*
		genotype1 = read_channel_altera(chan_LS2Conf_LS1_genotype);
		if (i == 0) {mode[0] = 0x01; bound_tmp++;}
		genotype[0][i & MASK_GENOTYPE] = genotype1;
		*/
		if (LS2_end_valid) {
		mode[1] = 0x02; bound_tmp++;
		/*
		if (i == 0) {mode[1] = 0x02; bound_tmp++;}
		genotype[1][i & MASK_GENOTYPE] = genotype2;
		*/

		if (LS3_end_valid) {
		mode[2] = 0x03; bound_tmp++;
		/*
		if (i == 0) {mode[2] = 0x03; bound_tmp++;}
		genotype[2][i & MASK_GENOTYPE] = genotype3;
		*/
		}
		else { // LS1: yes, LS2: no
		if (LS3_end_valid) {mode[1] = 0x03; bound_tmp++;
		if (LS4_end_valid) {mode[2] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[3] = 0x05; bound_tmp++;}
		}
		else {
		if (LS3_end_valid) {
		mode[1] = 0x03; bound_tmp++;
		/*
		if (i == 0) {mode[1] = 0x03; bound_tmp++;}
		genotype[1][i & MASK_GENOTYPE] = genotype3;
		*/
		if (LS5_end_valid) {mode[2] = 0x05; bound_tmp++;}
		}
		}
		else { // LS1: yes, LS2: no, LS3: no
		if (LS4_end_valid) {mode[1] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[2] = 0x05; bound_tmp++;}
		}
		else {
		if (LS2_end_valid) {
		mode[0] = 0x02; bound_tmp++;
		/*
		if (i == 0) {mode[0] = 0x02; bound_tmp++;}
		genotype[0][i & MASK_GENOTYPE] = genotype2;
		*/
		if (LS5_end_valid) {mode[1] = 0x05; bound_tmp++;}
		}

		if (LS3_end_valid) {
		mode[1] = 0x03; bound_tmp++;
		/*
		if (i == 0) {mode[1] = 0x03; bound_tmp++;}
		genotype[1][i & MASK_GENOTYPE] = genotype3;
		*/
		}
		}
		}
		else { // LS1: no
		if (LS2_end_valid) {mode[0] = 0x02; bound_tmp++;
		if (LS3_end_valid) {mode[1] = 0x03; bound_tmp++;
		if (LS4_end_valid) {mode[2] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[3] = 0x05; bound_tmp++;}
		}
		else {
		if (LS3_end_valid) {
		mode[0] = 0x03; bound_tmp++;
		/*
		if (i == 0) {mode[0] = 0x03; bound_tmp++;}
		genotype[0][i & MASK_GENOTYPE] = genotype3;
		*/
		if (LS5_end_valid) {mode[2] = 0x05; bound_tmp++;}
		}
		}
		else { // LS1: no, LS2: yes, LS3: no
		if (LS4_end_valid) {mode[1] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[2] = 0x05; bound_tmp++;}
		}
		else {
		if (LS5_end_valid) {mode[1] = 0x05; bound_tmp++;}
		}
		}
		}
		else { // LS1: no, LS2: no
		if (LS3_end_valid) {mode[0] = 0x03; bound_tmp++;
		if (LS4_end_valid) {mode[1] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[2] = 0x05; bound_tmp++;}
		}
		else {
		if (LS5_end_valid) {mode[1] = 0x05; bound_tmp++;}
		}
		}
		else { // LS1: no, LS2: no, LS3: no
		if (LS4_end_valid) {mode[0] = 0x04; bound_tmp++;
		if (LS5_end_valid) {mode[1] = 0x05; bound_tmp++;}
		}
		else {
		if (LS5_end_valid) {mode[0] = 0x05; bound_tmp++;}
		}

		}
		/*
		} // End of for-loop for (uchar i=0; i<DockConst_num_of_genes; i++) { }
		*/
		}
		}
		}
		} // End if (active == true)

		uchar bound = active ? bound_tmp : 1;

ofdock_taskpar_alt/device/Krnl_InterE.cl

+6 −0

Original line number	Diff line number	Diff line
		@@ -485,6 +485,12 @@ while(active) {

		// LS 3
		case 0x03: write_channel_altera(chan_Intere2StoreLS_LS3_intere, final_interE); break;

		// LS 4
		case 0x04: write_channel_altera(chan_Intere2StoreLS_LS4_intere, final_interE); break;

		// LS 5
		case 0x05: write_channel_altera(chan_Intere2StoreLS_LS5_intere, final_interE); break;
		}
		// --------------------------------------------------------------