Skip to content
GitLab
Menu
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
docking
ocladock
Commits
0c219134
Commit
0c219134
authored
Jul 27, 2017
by
Leonardo Solis
Browse files
Update README.md
parent
a1d29791
Changes
1
Hide whitespace changes
Inline
Side-by-side
README.md
View file @
0c219134
...
...
@@ -27,7 +27,7 @@ use the Download icon (close to the top right of this webpage, just above the li
## Prerequisites
| Operating system | CPU | GPU |
|:----------------
-
|:----------------------------:|:------------------:|
|:----------------
:
|:----------------------------:|:------------------:|
| Linux | Intel SDK for OpenCL v1.2 | AMD APP SDK v3.0 |
| Windows | Intel SDK for OpenCL 2016 R3 | AMD APP SDK v3.0 |
...
...
@@ -49,18 +49,18 @@ You only need to do this if you want to target our sources to a different system
make
DEVICE
=
<TYPE>
NUMWI
=
<NWI>
```
| Parameters | Description | Values |
|:----------
-
|:----------------------:|:------------:|
| Parameters | Description | Values
|
|:----------
:
|:----------------------:|:------------
----
:|
|
`<TYPE>`
| Accelerator chosen |
`CPU`
,
`GPU`
|
|
`<NWI>`
| OpenCL work-group size |
`16`
,
`32`
,
`64`
|
|
`<NWI>`
| OpenCL work-group size |
`16`
,
`32`
,
`64`
|
After successful compilation, the host binary
**ocladock_<type>_<N>wi**
is placed under
[
bin
](
./bin
)
.
| Binary-name portion | Description | Values |
|:---------------|:----------------------:|:-----------------:|
|
**<type>**
| Accelerator chosen |
`cpu`
,
`gpu`
|
|
**<N>**
| OpenCL work-group size |
`16`
,
`32`
,
`64`
|
| Binary-name portion | Description
| Values |
|:---------------
----:
|:----------------------:|:-----------------:|
|
**<type>**
| Accelerator chosen |
`cpu`
,
`gpu`
|
|
**<N>**
| OpenCL work-group size |
`16`
,
`32`
,
`64`
|
## Compilation on Windows
...
...
@@ -74,8 +74,8 @@ A Microsoft Visual Studio 2013 solution for two configurations **_ocladock-cpu-d
./bin/ocladock_<
type
>
_<N>wi
-ffile
<protein>.maps.fld
-lfile
<ligand>.pdbqt
-nrun
<nruns>
```
| Mandatory options | Description | Value |
|:-----------------:|:-------------:|:-------------------:|
| Mandatory options | Description | Value
|
|:-----------------:|:-------------:|:-------------------
------
:|
| -ffile |Protein file |
<
protein
>
.maps.fld |
| -lfile |Ligand file |
<
ligand
>
.pdbqt |
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment